CRISPRone

CRISPRone report for GCA_002021635.2_ASM202163v2

♦ Seq 1: MWLC02000125.1 Pseudomonas aeruginosa strain COPD6d Contig60, whole genome shotgun sequence

⇒Summary: seq-len = 35363 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24117-35336 bp Zoom in on locus 1 x13 x32 CRISPR array Location: 24117-24865 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 24117-24865 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 25048-25611 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25615-26643 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26654-27637 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27624-28928 bp Gene: COG1203:cas3 Type: Type-I Location: 28986-32216 bp Gene: cd09718:cas1 Type: universal Location: 32213-33187 bp CRISPR array Location: 33449-35336 bp Num of repeats: 32 Spacers: s13-s43 CRISPR array Location: 33449-35336 bp Num of repeats: 32 Spacers: s13-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 24117-24865 bp]: array | spacers
           [Locus range 33449-35336 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)