CRISPRone

CRISPRone report for GCA_002088135.1_ASM208813v1

♦ Seq 1: MWZH01000048.1 Pseudomonas aeruginosa strain UQCCR 576652281 AC25 NODE_48_length_36904_cov_37.1754, whole genome shotgun sequence

⇒Summary: seq-len = 15814 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 875-11726 bp Zoom in on locus 1 x11 x28 CRISPR array Location: 875-1503 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 875-1503 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 1754-2728 bp Gene: COG1203:cas3 Type: Type-I Location: 2725-5955 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6013-7317 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7304-8287 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8298-9326 bp Gene: cd09739:cas6f Type: other Location: 9330-9893 bp CRISPR array Location: 10078-11726 bp Num of repeats: 28 Spacers: s11-s37 CRISPR array Location: 10078-11726 bp Num of repeats: 28 Spacers: s11-s37 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 875-1503 bp]: array | spacers
           [Locus range 10078-11726 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)