CRISPRone

CRISPRone report for GCA_002088165.2_ASM208816v2

♦ Seq 1: MWZG02000162.1 Pseudomonas aeruginosa strain UQCCR 462667354 AA24 NODE_139_length_14237_cov_39.5607, whole genome shotgun sequence

⇒Summary: seq-len = 13678 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 109-10609 bp Zoom in on locus 1 x18 x15 CRISPR array Location: 109-1157 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 109-1157 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09718:cas1 Type: universal Location: 1418-2392 bp Gene: COG1203:cas3 Type: Type-I Location: 2389-5619 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5677-6981 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6968-7951 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7962-8990 bp Gene: cd09739:cas6f Type: other Location: 8994-9557 bp CRISPR array Location: 9742-10609 bp Num of repeats: 15 Spacers: s18-s31 CRISPR array Location: 9742-10609 bp Num of repeats: 15 Spacers: s18-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 109-1157 bp]: array | spacers
           [Locus range 9742-10609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWZG02000194.1 Pseudomonas aeruginosa strain UQCCR 462667354 AA24 NODE_111_length_18205_cov_37.1493, whole genome shotgun sequence

⇒Summary: seq-len = 18153 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 109-1038 bp Zoom in on locus 1 x16 CRISPR array Location: 109-1038 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 109-1038 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 109-1038 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)