CRISPRone

CRISPRone report for GCA_002088215.1_ASM208821v1

♦ Seq 1: MWWM01000007.1 Pseudomonas aeruginosa strain UQCCR 393788042 K AB94 NODE_7_length_202283_cov_19.6001, whole genome shotgun sequence

⇒Summary: seq-len = 202283 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132035-142729 bp Zoom in on locus 1 x13 x12 CRISPR array Location: 132035-132796 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 132035-132796 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 132861-133160 bp Gene: COG1518:cas1 Type: universal Location: 133157-133606 bp Gene: COG1518:cas1 Type: universal Location: 133613-134047 bp Gene: pfam08798:cas6e Type: other Location: 134074-134613 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 134660-135322 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 135324-136466 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 136476-137006 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 137003-138571 bp Gene: cd09641:cas3HD Type: Type-I Location: 138574-141255 bp CRISPR array Location: 142030-142729 bp Num of repeats: 12 Spacers: s13-s23 CRISPR array Location: 142030-142729 bp Num of repeats: 12 Spacers: s13-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 132035-132796 bp]: array | spacers
           [Locus range 142030-142729 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWWM01000033.1 Pseudomonas aeruginosa strain UQCCR 393788042 K AB94 NODE_33_length_78964_cov_21.9386, whole genome shotgun sequence

⇒Summary: seq-len = 78964 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25610-38700 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 25610-25912 bp Gene: cd09641:cas3HD Type: Type-I Location: 35594-37453 bp Gene: unk Type: unknown Location: 37626-37859 bp Gene: unk Type: unknown Location: 37974-38348 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 38395-38700 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)