CRISPRone

CRISPRone report for GCA_002088225.1_ASM208822v1

♦ Seq 1: MWWL01000287.1 Pseudomonas aeruginosa strain UQCCR 364724162 AA73 NODE_62_length_31281_cov_29.7851, whole genome shotgun sequence

⇒Summary: seq-len = 31281 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27-10343 bp Zoom in on locus 1 x11 x13 CRISPR array Location: 27-655 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 27-655 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 919-1893 bp Gene: COG1203:cas3 Type: Type-I Location: 1890-5120 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5535-6836 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6823-7806 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7817-8845 bp Gene: cd09739:cas6f Type: other Location: 8849-9412 bp CRISPR array Location: 9596-10343 bp Num of repeats: 13 Spacers: s11-s22 CRISPR array Location: 9596-10343 bp Num of repeats: 13 Spacers: s11-s22 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27-655 bp]: array | spacers
           [Locus range 9596-10343 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWWL01000254.1 Pseudomonas aeruginosa strain UQCCR 364724162 AA73 NODE_95_length_21428_cov_31.8189, whole genome shotgun sequence

⇒Summary: seq-len = 21428 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 229-616 bp Zoom in on locus 1 x7 CRISPR array Location: 229-616 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 229-616 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 229-616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MWWL01000135.1 Pseudomonas aeruginosa strain UQCCR 364724162 AA73 NODE_214_length_3934_cov_21.3733, whole genome shotgun sequence

⇒Summary: seq-len = 3934 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27-415 bp Zoom in on locus 1 x7 CRISPR array Location: 27-415 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 27-415 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 27-415 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MWWL01000188.1 Pseudomonas aeruginosa strain UQCCR 364724162 AA73 NODE_161_length_9455_cov_33.0561, whole genome shotgun sequence

⇒Summary: seq-len = 9455 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4329-4716 bp Zoom in on locus 1 x7 CRISPR array Location: 4329-4716 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 4329-4716 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4329-4716 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)