CRISPRone

CRISPRone report for GCA_002135675.1_ASM213567v1

♦ Seq 1: NFFJ01000018.1 Pseudomonas aeruginosa strain S794_C17_BS S794_C17_BS_NODE_18_length_159274, whole genome shotgun sequence

⇒Summary: seq-len = 159274 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62417-63044 bp Zoom in on locus 1 x11 CRISPR array Location: 62417-63044 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 62417-63044 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62417-63044 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NFFJ01000035.1 Pseudomonas aeruginosa strain S794_C17_BS S794_C17_BS_NODE_35_length_85169, whole genome shotgun sequence

⇒Summary: seq-len = 85169 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42290-52875 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 42290-43159 bp Gene: pfam00078:RT Type: other Location: 48068-49336 bp Gene: unk Type: unknown Location: 49486-49884 bp Gene: unk Type: unknown Location: 50068-50247 bp Gene: cls000170:cas4 Type: Type-I Location: 51331-52875 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)