CRISPRone

CRISPRone report for GCA_002136065.1_ASM213606v1

♦ Seq 1: NFGH01000030.1 Pseudomonas aeruginosa strain S434_C09_BS S434_C09_BS_NODE_30_length_85067, whole genome shotgun sequence

⇒Summary: seq-len = 85067 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16763-23551 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 16763-19984 bp Gene: pfam13280:WYL Type: other Location: 19997-20905 bp Gene: unk Type: unknown Location: 21185-22075 bp Gene: unk Type: unknown Location: 22210-22527 bp Gene: mkCas0115:csx3 Type: other Location: 22520-23551 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NFGH01000028.1 Pseudomonas aeruginosa strain S434_C09_BS S434_C09_BS_NODE_28_length_86210, whole genome shotgun sequence

⇒Summary: seq-len = 86210 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 205-1013 bp Zoom in on locus 1 x14 CRISPR array Location: 205-1013 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 205-1013 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 205-1013 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)