CRISPRone

CRISPRone report for GCA_002136135.1_ASM213613v1

♦ Seq 1: NFGK01000028.1 Pseudomonas aeruginosa strain S422_C09_BS S422_C09_BS_NODE_28_length_85592, whole genome shotgun sequence

⇒Summary: seq-len = 85592 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17288-24076 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 17288-20509 bp Gene: pfam13280:WYL Type: other Location: 20522-21430 bp Gene: unk Type: unknown Location: 21710-22600 bp Gene: unk Type: unknown Location: 22735-23052 bp Gene: mkCas0115:csx3 Type: other Location: 23045-24076 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NFGK01000036.1 Pseudomonas aeruginosa strain S422_C09_BS S422_C09_BS_NODE_36_length_66352, whole genome shotgun sequence

⇒Summary: seq-len = 66352 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 205-1013 bp Zoom in on locus 1 x14 CRISPR array Location: 205-1013 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 205-1013 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 205-1013 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)