CRISPRone

CRISPRone report for GCA_002136165.1_ASM213616v1

♦ Seq 1: NFGM01000028.1 Pseudomonas aeruginosa strain S292_C06_RS S292_C06_RS_NODE_28_length_79868, whole genome shotgun sequence

⇒Summary: seq-len = 79868 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15310-22098 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 15310-18531 bp Gene: pfam13280:WYL Type: other Location: 18544-19452 bp Gene: unk Type: unknown Location: 19732-20622 bp Gene: unk Type: unknown Location: 20757-21074 bp Gene: mkCas0115:csx3 Type: other Location: 21067-22098 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NFGM01000003.1 Pseudomonas aeruginosa strain S292_C06_RS S292_C06_RS_NODE_3_length_411480, whole genome shotgun sequence

⇒Summary: seq-len = 411480 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 410519-411326 bp Zoom in on locus 1 x14 CRISPR array Location: 410519-411326 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 410519-411326 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 410519-411326 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)