CRISPRone

CRISPRone report for GCA_002136295.1_ASM213629v1

♦ Seq 1: NFGV01000011.1 Pseudomonas aeruginosa strain S53_C01_BS S53_C01_BS_NODE_11_length_206140, whole genome shotgun sequence

⇒Summary: seq-len = 206140 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 186941-200031 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 186941-187246 bp Gene: unk Type: unknown Location: 187782-188372 bp Gene: cd09641:cas3HD Type: Type-I Location: 188188-190047 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 199729-200031 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NFGV01000012.1 Pseudomonas aeruginosa strain S53_C01_BS S53_C01_BS_NODE_12_length_205038, whole genome shotgun sequence

⇒Summary: seq-len = 205038 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132025-142719 bp Zoom in on locus 1 x13 x12 CRISPR array Location: 132025-132786 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 132025-132786 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 132851-133150 bp Gene: COG1518:cas1 Type: universal Location: 133147-133596 bp Gene: COG1518:cas1 Type: universal Location: 133603-134037 bp Gene: pfam08798:cas6e Type: other Location: 134064-134603 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 134650-135312 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 135314-136456 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 136466-136996 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 136993-138561 bp Gene: cd09641:cas3HD Type: Type-I Location: 138564-141245 bp CRISPR array Location: 142020-142719 bp Num of repeats: 12 Spacers: s13-s23 CRISPR array Location: 142020-142719 bp Num of repeats: 12 Spacers: s13-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 132025-132786 bp]: array | spacers
           [Locus range 142020-142719 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)