CRISPRone

CRISPRone report for GCA_002136445.1_ASM213644v1

♦ Seq 1: NFGF01000004.1 Pseudomonas aeruginosa strain S440_C09_BS S440_C09_BS_NODE_4_length_411480, whole genome shotgun sequence

⇒Summary: seq-len = 411480 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 410519-411326 bp Zoom in on locus 1 x14 CRISPR array Location: 410519-411326 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 410519-411326 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 410519-411326 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NFGF01000026.1 Pseudomonas aeruginosa strain S440_C09_BS S440_C09_BS_NODE_26_length_84967, whole genome shotgun sequence

⇒Summary: seq-len = 84967 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61467-68255 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 61467-62498 bp Gene: unk Type: unknown Location: 62943-63833 bp Gene: pfam13280:WYL Type: other Location: 64113-65021 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 65034-68255 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)