CRISPRone

CRISPRone report for GCA_002136535.1_ASM213653v1

♦ Seq 1: NFGU01000001.1 Pseudomonas aeruginosa strain S57_C01_BS S57_C01_BS_NODE_1_length_464687, whole genome shotgun sequence

⇒Summary: seq-len = 464687 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 321958-332653 bp Zoom in on locus 1 x12 x13 CRISPR array Location: 321958-322658 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 321958-322658 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 323432-326113 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 326116-327684 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 327681-328211 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 328221-329363 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 329365-330027 bp Gene: pfam08798:cas6e Type: other Location: 330002-330613 bp Gene: COG1518:cas1 Type: universal Location: 330640-331074 bp Gene: COG1518:cas1 Type: universal Location: 331081-331530 bp Gene: pfam09707:cas2 Type: universal Location: 331527-331826 bp CRISPR array Location: 331891-332653 bp Num of repeats: 13 Spacers: s12-s23 CRISPR array Location: 331891-332653 bp Num of repeats: 13 Spacers: s12-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 321958-322658 bp]: array | spacers
           [Locus range 331891-332653 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NFGU01000042.1 Pseudomonas aeruginosa strain S57_C01_BS S57_C01_BS_NODE_42_length_52837, whole genome shotgun sequence

⇒Summary: seq-len = 52837 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6110-19200 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 6110-6412 bp Gene: cd09641:cas3HD Type: Type-I Location: 16094-17953 bp Gene: unk Type: unknown Location: 18126-18359 bp Gene: unk Type: unknown Location: 18474-18848 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 18895-19200 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)