CRISPRone

CRISPRone report for GCA_002156655.1_ASM215665v1

♦ Seq 1: MWKP01000069.1 Pseudomonas aeruginosa strain ICB10P Cotig_70, whole genome shotgun sequence

⇒Summary: seq-len = 44168 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 140-10457 bp Zoom in on locus 1 x26 x4 CRISPR array Location: 140-1667 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 140-1667 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 1927-2901 bp Gene: COG1203:cas3 Type: Type-I Location: 2898-6128 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6186-7490 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7477-8460 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8471-9499 bp Gene: cd09739:cas6f Type: other Location: 9503-10066 bp CRISPR array Location: 10250-10457 bp Num of repeats: 4 Spacers: s26-s28 CRISPR array Location: 10250-10457 bp Num of repeats: 4 Spacers: s26-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 140-1667 bp]: array | spacers
           [Locus range 10250-10457 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MWKP01000125.1 Pseudomonas aeruginosa strain ICB10P Cotig_126, whole genome shotgun sequence

⇒Summary: seq-len = 28453 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26908-28138 bp Zoom in on locus 1 x21 CRISPR array Location: 26908-28138 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 26908-28138 bp Num of repeats: 21 Spacers: s1-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 26908-28138 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)