CRISPRone

CRISPRone report for GCA_002165155.1_ASM216515v1

♦ Seq 1: NGUY01000002.1 Clostridioides difficile strain WCHCD15108050 NODE_2_length_336617_cov_74.0446, whole genome shotgun sequence

⇒Summary: seq-len = 336617 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91507-91795 bp]: array | spacers
           [Locus range 199668-200092 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NGUY01000009.1 Clostridioides difficile strain WCHCD15108050 NODE_9_length_139578_cov_69.9281, whole genome shotgun sequence

⇒Summary: seq-len = 139578 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 76689-77775 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NGUY01000005.1 Clostridioides difficile strain WCHCD15108050 NODE_5_length_201234_cov_90.1281, whole genome shotgun sequence

⇒Summary: seq-len = 201234 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 73350-75020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NGUY01000004.1 Clostridioides difficile strain WCHCD15108050 NODE_4_length_279336_cov_83.0997, whole genome shotgun sequence

⇒Summary: seq-len = 279336 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 82943-84159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: NGUY01000030.1 Clostridioides difficile strain WCHCD15108050 NODE_30_length_24264_cov_90.8816, whole genome shotgun sequence

⇒Summary: seq-len = 24264 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21197-22406 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: NGUY01000001.1 Clostridioides difficile strain WCHCD15108050 NODE_1_length_409033_cov_73.7162, whole genome shotgun sequence

⇒Summary: seq-len = 409033 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: NGUY01000038.1 Clostridioides difficile strain WCHCD15108050 NODE_38_length_5266_cov_93.6358, whole genome shotgun sequence

⇒Summary: seq-len = 5266 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 739-1555 bp]: array | spacers
           [Locus range 1616-1777 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: NGUY01000003.1 Clostridioides difficile strain WCHCD15108050 NODE_3_length_284895_cov_78.8323, whole genome shotgun sequence

⇒Summary: seq-len = 284895 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 201754-202045 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: NGUY01000020.1 Clostridioides difficile strain WCHCD15108050 NODE_20_length_95019_cov_64.9705, whole genome shotgun sequence

⇒Summary: seq-len = 95019 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90116-90410 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)