CRISPRone

CRISPRone report for GCA_002165175.1_ASM216517v1

♦ Seq 1: NGUX01000005.1 Clostridioides difficile strain WCHCD15116362 NODE_5_length_199170_cov_75.2291, whole genome shotgun sequence

⇒Summary: seq-len = 199170 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 182871-183099 bp]: array | spacers
           [Locus range 195366-196582 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NGUX01000014.1 Clostridioides difficile strain WCHCD15116362 NODE_14_length_123565_cov_62.4183, whole genome shotgun sequence

⇒Summary: seq-len = 123565 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60249-61599 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: NGUX01000026.1 Clostridioides difficile strain WCHCD15116362 NODE_26_length_64929_cov_75.3207, whole genome shotgun sequence

⇒Summary: seq-len = 64929 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: NGUX01000001.1 Clostridioides difficile strain WCHCD15116362 NODE_1_length_346976_cov_66.8485, whole genome shotgun sequence

⇒Summary: seq-len = 346976 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 959-1249 bp]: array | spacers
           [Locus range 100052-100812 bp]: array | spacers
           [Locus range 208639-209726 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: NGUX01000004.1 Clostridioides difficile strain WCHCD15116362 NODE_4_length_200974_cov_82.0409, whole genome shotgun sequence

⇒Summary: seq-len = 200974 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 73294-74769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: NGUX01000009.1 Clostridioides difficile strain WCHCD15116362 NODE_9_length_137994_cov_87.7165, whole genome shotgun sequence

⇒Summary: seq-len = 137994 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 135475-136822 bp]: array | spacers
           [Locus range 136883-137044 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: NGUX01000045.1 Clostridioides difficile strain WCHCD15116362 NODE_45_length_7554_cov_59.0904, whole genome shotgun sequence

⇒Summary: seq-len = 7554 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 401-1421 bp]: array | spacers
           [Locus range 2072-3620 bp]: array | spacers
           [Locus range 6320-6415 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: NGUX01000002.1 Clostridioides difficile strain WCHCD15116362 NODE_2_length_315855_cov_74.1167, whole genome shotgun sequence

⇒Summary: seq-len = 315855 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 233562-233657 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: NGUX01000018.1 Clostridioides difficile strain WCHCD15116362 NODE_18_length_94806_cov_58.968, whole genome shotgun sequence

⇒Summary: seq-len = 94806 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90102-90197 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)