CRISPRone

CRISPRone report for GCA_002188695.1_ASM218869v1

♦ Seq 1: NINN01000019.1 Pseudomonas aeruginosa strain FFUP_PS_65 Contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 92288 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25721-38622 bp Zoom in on locus 1 x45 x28 CRISPR array Location: 25721-28391 bp Num of repeats: 45 Spacers: s1-s44 CRISPR array Location: 25721-28391 bp Num of repeats: 45 Spacers: s1-s44 Gene: cd09718:cas1 Type: universal Location: 28652-29626 bp Gene: COG1203:cas3 Type: Type-I Location: 29623-32853 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 32911-34215 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 34202-35185 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 35196-36224 bp Gene: cd09739:cas6f Type: other Location: 36228-36791 bp CRISPR array Location: 36975-38622 bp Num of repeats: 28 Spacers: s45-s71 CRISPR array Location: 36975-38622 bp Num of repeats: 28 Spacers: s45-s71 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25721-28391 bp]: array | spacers
           [Locus range 36975-38622 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)