CRISPRone

CRISPRone report for GCA_002193745.1_ASM219374v1

♦ Seq 1: NION01000024.1 Pseudomonas aeruginosa strain 2321 2321_NODE_29.ctg_1, whole genome shotgun sequence

⇒Summary: seq-len = 69252 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38050-49377 bp Zoom in on locus 1 x21 x20 CRISPR array Location: 38050-39278 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 38050-39278 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09739:cas6f Type: other Location: 39460-40023 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40027-41055 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41066-42049 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42036-43337 bp Gene: COG1203:cas3 Type: Type-I Location: 43748-46978 bp Gene: cd09718:cas1 Type: universal Location: 46975-47949 bp CRISPR array Location: 48210-49377 bp Num of repeats: 20 Spacers: s21-s39 CRISPR array Location: 48210-49377 bp Num of repeats: 20 Spacers: s21-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38050-39278 bp]: array | spacers
           [Locus range 48210-49377 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)