CRISPRone

CRISPRone report for GCA_002193755.1_ASM219375v1

♦ Seq 1: NIOT01000074.1 Pseudomonas aeruginosa strain 2570 2570_NODE_23.ctg_1, whole genome shotgun sequence

⇒Summary: seq-len = 112170 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 63346-72086 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 63346-64215 bp Gene: unk Type: unknown Location: 64556-64768 bp Gene: unk Type: unknown Location: 64874-67012 bp Gene: cls000038:cas7 Type: Subtype-I-B Location: 67012-68793 bp Gene: unk Type: unknown Location: 67252-67449 bp Gene: cd09639:cas3 Type: Type-I Location: 69561-72086 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NIOT01000011.1 Pseudomonas aeruginosa strain 2570 2570_NODE_1.ctg_1, whole genome shotgun sequence

⇒Summary: seq-len = 416772 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 415871-416618 bp Zoom in on locus 1 x13 CRISPR array Location: 415871-416618 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 415871-416618 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 415871-416618 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)