CRISPRone

CRISPRone report for GCA_002205335.1_ASM220533v1

♦ Seq 1: CP021999.1 Pseudomonas aeruginosa strain Pa84 chromosome, complete genome

⇒Summary: seq-len = 6566724 bp; # of CRISPR array = 3; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4328236-4339117 bp Zoom in on locus 1 x18 x2 x7 CRISPR array Location: 4328236-4329303 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 4328236-4329303 bp Num of repeats: 18 Spacers: s1-s17 Gene: pfam09707:cas2 Type: universal Location: 4329368-4329667 bp Gene: cd09719:cas1 Type: universal Location: 4329664-4330554 bp Gene: pfam08798:cas6e Type: other Location: 4330581-4331120 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4331167-4331829 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4331831-4332973 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4332983-4333513 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 4333510-4335078 bp Gene: cd09641:cas3HD Type: Type-I Location: 4335081-4337762 bp CRISPR array Location: 4338539-4338628 bp Num of repeats: 2 Spacers: s18-s18 CRISPR array Location: 4338539-4338628 bp Num of repeats: 2 Spacers: s18-s18 CRISPR array Location: 4338723-4339117 bp Num of repeats: 7 Spacers: s19-s24 CRISPR array Location: 4338723-4339117 bp Num of repeats: 7 Spacers: s19-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4328236-4329303 bp]: array | spacers
           [Locus range 4338539-4338628 bp]: array | spacers
           [Locus range 4338723-4339117 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)