CRISPRone

CRISPRone report for GCA_002211545.1_ASM221154v1

♦ Seq 1: MJMC01000003.1 Pseudomonas aeruginosa strain PA77 PA77_HGAP3_2SMC_c3, whole genome shotgun sequence

⇒Summary: seq-len = 994613 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 385596-386224 bp Zoom in on locus 1 x11 CRISPR array Location: 385596-386224 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 385596-386224 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 385596-386224 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MJMC01000002.1 Pseudomonas aeruginosa strain PA77 PA77_HGAP3_2SMC_c2, whole genome shotgun sequence

⇒Summary: seq-len = 2296629 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2186845-2197430 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 2186845-2187714 bp Gene: pfam00078:RT Type: other Location: 2192623-2193891 bp Gene: unk Type: unknown Location: 2194041-2194439 bp Gene: unk Type: unknown Location: 2194623-2194802 bp Gene: cls000170:cas4 Type: Type-I Location: 2195886-2197430 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)