CRISPRone

CRISPRone report for GCA_002215345.1_ASM221534v1

♦ Seq 1: CP017293.1 Pseudomonas aeruginosa strain PA83 chromosome, complete genome

⇒Summary: seq-len = 6816227 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1564552-1565480 bp 2 Locus 2: 3079377-3090955 bp Zoom in on locus 1 x16 Zoom in on locus 2 x23 x28 CRISPR array Location: 1564552-1565480 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 1564552-1565480 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 3079377-3080722 bp Num of repeats: 23 Spacers: s16-s37 CRISPR array Location: 3079377-3080722 bp Num of repeats: 23 Spacers: s16-s37 Gene: cd09739:cas6f Type: other Location: 3080906-3081469 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3081473-3082501 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3082512-3083495 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3083482-3084786 bp Gene: COG1203:cas3 Type: Type-I Location: 3084844-3088074 bp Gene: cd09718:cas1 Type: universal Location: 3088071-3089045 bp CRISPR array Location: 3089307-3090955 bp Num of repeats: 28 Spacers: s38-s64 CRISPR array Location: 3089307-3090955 bp Num of repeats: 28 Spacers: s38-s64 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1564552-1565480 bp]: array | spacers
           [Locus range 3079377-3080722 bp]: array | spacers
           [Locus range 3089307-3090955 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)