CRISPRone

CRISPRone report for GCA_002216345.1_ASM221634v1

♦ Seq 1: NKYA01000038.1 Pseudomonas aeruginosa strain Pae110 NODE_38_length_44351_cov_19.4948, whole genome shotgun sequence

⇒Summary: seq-len = 44351 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 34411-44009 bp Zoom in on locus 1 x28 CRISPR array Location: 34411-36232 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 34411-36232 bp Num of repeats: 28 Spacers: s1-s27 Gene: cd09725:cas2 Type: universal Location: 36414-36704 bp Gene: cd09721:cas1 Type: universal Location: 36714-37754 bp Gene: pfam01930:cas4 Type: Type-I Location: 37758-38390 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 38409-39278 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 39290-41053 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 41050-41724 bp Gene: cd09641:cas3HD Type: Type-I Location: 41775-44009 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 34411-36232 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)