CRISPRone

CRISPRone report for GCA_002223805.1_ASM222380v1

♦ Seq 1: CP019338.1 Pseudomonas aeruginosa strain L10 chromosome, complete genome

⇒Summary: seq-len = 6661962 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2984027-2994471 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 2984027-2984715 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2984027-2984715 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 2984964-2985527 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2985531-2986559 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2986570-2987553 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2987540-2988844 bp Gene: COG1203:cas3 Type: Type-I Location: 2988902-2992132 bp Gene: cd09718:cas1 Type: universal Location: 2992129-2993103 bp CRISPR array Location: 2993364-2994471 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 2993364-2994471 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2984027-2984715 bp]: array | spacers
           [Locus range 2993364-2994471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)