CRISPRone

CRISPRone report for GCA_002239505.1_ASM223950v1

♦ Seq 1: NLBB01000052.1 Pseudomonas aeruginosa strain Env_32 contig-2000046, whole genome shotgun sequence

⇒Summary: seq-len = 76011 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27142-38243 bp Zoom in on locus 1 x22 x21 CRISPR array Location: 27142-28431 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 27142-28431 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 28691-29665 bp Gene: COG1203:cas3 Type: Type-I Location: 29662-32892 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 32950-34254 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 34241-35224 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 35235-36263 bp Gene: cd09739:cas6f Type: other Location: 36267-36830 bp CRISPR array Location: 37015-38243 bp Num of repeats: 21 Spacers: s22-s41 CRISPR array Location: 37015-38243 bp Num of repeats: 21 Spacers: s22-s41 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27142-28431 bp]: array | spacers
           [Locus range 37015-38243 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)