CRISPRone

CRISPRone report for GCA_002300855.1_ASM230085v1

♦ Seq 1: MNBQ01000023.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000023, whole genome shotgun sequence

⇒Summary: seq-len = 61730 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56625-58100 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MNBQ01000006.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 201264 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 113942-114635 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MNBQ01000003.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 273193 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 238644-239398 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MNBQ01000005.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000005, whole genome shotgun sequence

⇒Summary: seq-len = 204057 bp; # of CRISPR array = 1; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 124774-124869 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MNBQ01000012.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000012, whole genome shotgun sequence

⇒Summary: seq-len = 141946 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 67466-67561 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MNBQ01000032.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000032, whole genome shotgun sequence

⇒Summary: seq-len = 29390 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18908-19266 bp]: array | spacers
           [Locus range 21072-21300 bp]: array | spacers
           [Locus range 23054-23148 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MNBQ01000027.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000027, whole genome shotgun sequence

⇒Summary: seq-len = 50025 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45841-45936 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MNBQ01000001.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 407079 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 157411-158298 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MNBQ01000002.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 277460 bp; # of CRISPR array = 0; # of cas gene = 9  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MNBQ01000045.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000045, whole genome shotgun sequence

⇒Summary: seq-len = 6414 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4238-4663 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MNBQ01000019.1 Clostridioides difficile strain 5479-NonSp/ST229 5479_contig000019, whole genome shotgun sequence

⇒Summary: seq-len = 76742 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18779-19072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)