CRISPRone

CRISPRone report for GCA_002300865.1_ASM230086v1

♦ Seq 1: MNBR01000038.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000038, whole genome shotgun sequence

⇒Summary: seq-len = 34833 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9947-10632 bp]: array | spacers
           [Locus range 12335-12560 bp]: array | spacers
           [Locus range 14254-15074 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MNBR01000019.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000019, whole genome shotgun sequence

⇒Summary: seq-len = 48798 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38576-40384 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MNBR01000002.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 79918 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15123-15413 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MNBR01000041.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000041, whole genome shotgun sequence

⇒Summary: seq-len = 31882 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3085-3833 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MNBR01000064.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000064, whole genome shotgun sequence

⇒Summary: seq-len = 23824 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3615-4949 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MNBR01000145.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000145, whole genome shotgun sequence

⇒Summary: seq-len = 7739 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4607-5431 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MNBR01000009.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000009, whole genome shotgun sequence

⇒Summary: seq-len = 66658 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MNBR01000102.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000102, whole genome shotgun sequence

⇒Summary: seq-len = 14470 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10085-10581 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MNBR01000070.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000070, whole genome shotgun sequence

⇒Summary: seq-len = 20137 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19157-19515 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MNBR01000032.1 Clostridioides difficile strain 5480-E/ST6 5480_contig000032, whole genome shotgun sequence

⇒Summary: seq-len = 40827 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35453-35744 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)