CRISPRone

CRISPRone report for GCA_002300925.1_ASM230092v1

♦ Seq 1: MNBS01000109.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000109, whole genome shotgun sequence

⇒Summary: seq-len = 49243 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2966-4056 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MNBS01000230.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000230, whole genome shotgun sequence

⇒Summary: seq-len = 224000 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MNBS01000114.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000114, whole genome shotgun sequence

⇒Summary: seq-len = 43298 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21736-23142 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MNBS01000054.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000054, whole genome shotgun sequence

⇒Summary: seq-len = 75716 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 73497-73656 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MNBS01000096.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000096, whole genome shotgun sequence

⇒Summary: seq-len = 136088 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 132151-133165 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MNBS01000233.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000233, whole genome shotgun sequence

⇒Summary: seq-len = 249207 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 244732-245290 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MNBS01000033.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000033, whole genome shotgun sequence

⇒Summary: seq-len = 288088 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 72127-73798 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MNBS01000090.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000090, whole genome shotgun sequence

⇒Summary: seq-len = 263094 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 178297-178592 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MNBS01000065.1 Clostridioides difficile strain 5481-DH/ST42 5481_contig000065, whole genome shotgun sequence

⇒Summary: seq-len = 39677 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 208-1423 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)