CRISPRone

CRISPRone report for GCA_002300935.1_ASM230093v1

♦ Seq 1: MNBP01000034.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000034, whole genome shotgun sequence

⇒Summary: seq-len = 37892 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 32347-32576 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MNBP01000001.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 318232 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 252904-253584 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MNBP01000004.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000004, whole genome shotgun sequence

⇒Summary: seq-len = 190514 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 98220-98644 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MNBP01000023.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000023, whole genome shotgun sequence

⇒Summary: seq-len = 63107 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44917-46656 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MNBP01000008.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000008, whole genome shotgun sequence

⇒Summary: seq-len = 148375 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 146418-146512 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MNBP01000006.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 154941 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3397-3823 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MNBP01000055.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000055, whole genome shotgun sequence

⇒Summary: seq-len = 11147 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3396-4742 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MNBP01000002.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 277538 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86652-86814 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MNBP01000031.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000031, whole genome shotgun sequence

⇒Summary: seq-len = 48936 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45083-45770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MNBP01000043.1 Clostridioides difficile strain 5478-N/ST10 5478_contig000043, whole genome shotgun sequence

⇒Summary: seq-len = 29507 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18564-18789 bp]: array | spacers
           [Locus range 20589-20749 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)