CRISPRone

CRISPRone report for GCA_002301185.1_ASM230118v1

♦ Seq 1: MOPM01000016.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000016, whole genome shotgun sequence

⇒Summary: seq-len = 110681 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 104404-104833 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOPM01000002.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 377296 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 44344-44702 bp]: array | spacers
           [Locus range 289577-290194 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOPM01000021.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000021, whole genome shotgun sequence

⇒Summary: seq-len = 64468 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45244-46000 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOPM01000006.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 203801 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 93335-93496 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOPM01000030.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000030, whole genome shotgun sequence

⇒Summary: seq-len = 11523 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6534-7551 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOPM01000003.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 328209 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 240371-241520 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOPM01000001.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 479118 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 224736-226269 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOPM01000026.1 Clostridioides difficile strain 5496-Y/ST110 5496_contig000026, whole genome shotgun sequence

⇒Summary: seq-len = 51966 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7220-7313 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)