CRISPRone

CRISPRone report for GCA_002301405.1_ASM230140v1

♦ Seq 1: MOPT01000017.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000017, whole genome shotgun sequence

⇒Summary: seq-len = 90016 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44773-46512 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOPT01000006.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 221399 bp; # of CRISPR array = 1; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 123133-123360 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOPT01000001.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 508541 bp; # of CRISPR array = 1; # of cas gene = 8  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 265452-265547 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOPT01000002.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 403940 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 252322-252680 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOPT01000023.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000023, whole genome shotgun sequence

⇒Summary: seq-len = 63448 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 46235-46396 bp]: array | spacers
           [Locus range 47105-47597 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOPT01000004.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000004, whole genome shotgun sequence

⇒Summary: seq-len = 281863 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 122830-123650 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOPT01000012.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000012, whole genome shotgun sequence

⇒Summary: seq-len = 133959 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 31216-32164 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOPT01000022.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000022, whole genome shotgun sequence

⇒Summary: seq-len = 63917 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45113-45603 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MOPT01000015.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000015, whole genome shotgun sequence

⇒Summary: seq-len = 100178 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 84395-84818 bp]: array | spacers
           [Locus range 86586-87012 bp]: array | spacers
           [Locus range 88648-88743 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MOPT01000003.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 306561 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2118-2473 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MOPT01000014.1 Clostridioides difficile strain 5537-D/ST9 5537_contig000014, whole genome shotgun sequence

⇒Summary: seq-len = 103483 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 99619-100504 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)