CRISPRone

CRISPRone report for GCA_002301495.1_ASM230149v1

♦ Seq 1: MOQA01000010.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000010, whole genome shotgun sequence

⇒Summary: seq-len = 130626 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 52115-52407 bp]: array | spacers
           [Locus range 54011-54235 bp]: array | spacers
           [Locus range 56028-57047 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOQA01000003.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 217540 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124775-125665 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOQA01000024.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000024, whole genome shotgun sequence

⇒Summary: seq-len = 72197 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOQA01000015.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000015, whole genome shotgun sequence

⇒Summary: seq-len = 110204 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42945-43106 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOQA01000035.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000035, whole genome shotgun sequence

⇒Summary: seq-len = 43222 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38653-40067 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOQA01000052.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000052, whole genome shotgun sequence

⇒Summary: seq-len = 7983 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4723-5078 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOQA01000016.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000016, whole genome shotgun sequence

⇒Summary: seq-len = 108811 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4039-4529 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOQA01000040.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000040, whole genome shotgun sequence

⇒Summary: seq-len = 32985 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20115-20209 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MOQA01000020.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000020, whole genome shotgun sequence

⇒Summary: seq-len = 80220 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4215-5762 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MOQA01000001.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 278639 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 253180-255110 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MOQA01000019.1 Clostridioides difficile strain 5548-Y/ST2 5548_contig000019, whole genome shotgun sequence

⇒Summary: seq-len = 90083 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 58935-60412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)