CRISPRone

CRISPRone report for GCA_002301525.1_ASM230152v1

♦ Seq 1: MOQC01000027.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000027, whole genome shotgun sequence

⇒Summary: seq-len = 48108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34105-34330 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOQC01000007.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000007, whole genome shotgun sequence

⇒Summary: seq-len = 184281 bp; # of CRISPR array = 1; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 102732-102826 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOQC01000042.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000042, whole genome shotgun sequence

⇒Summary: seq-len = 7859 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2089-2251 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOQC01000002.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 309213 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOQC01000006.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 202851 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53591-54013 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOQC01000005.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000005, whole genome shotgun sequence

⇒Summary: seq-len = 277849 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26861-28739 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOQC01000001.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 379731 bp; # of CRISPR array = 6; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40106-40593 bp]: array | spacers
           [Locus range 42393-42553 bp]: array | spacers
           [Locus range 42788-43013 bp]: array | spacers
           [Locus range 45847-46203 bp]: array | spacers
           [Locus range 80771-81522 bp]: array | spacers
           [Locus range 99595-100617 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOQC01000004.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000004, whole genome shotgun sequence

⇒Summary: seq-len = 280345 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 105464-105956 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MOQC01000019.1 Clostridioides difficile strain 5550-AH/ST67 LCH5550_contig000019, whole genome shotgun sequence

⇒Summary: seq-len = 69569 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23761-24453 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)