CRISPRone

CRISPRone report for GCA_002301595.1_ASM230159v1

♦ Seq 1: MOQF01000022.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000022, whole genome shotgun sequence

⇒Summary: seq-len = 57661 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6055-7009 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOQF01000025.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000025, whole genome shotgun sequence

⇒Summary: seq-len = 45445 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 27887-28703 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOQF01000027.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000027, whole genome shotgun sequence

⇒Summary: seq-len = 42894 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13630-13924 bp]: array | spacers
           [Locus range 15722-15815 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOQF01000001.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 244209 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 168950-169640 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOQF01000047.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000047, whole genome shotgun sequence

⇒Summary: seq-len = 27593 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2932-3293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOQF01000041.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000041, whole genome shotgun sequence

⇒Summary: seq-len = 30683 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 27673-29224 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOQF01000020.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000020, whole genome shotgun sequence

⇒Summary: seq-len = 58806 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOQF01000101.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000100, whole genome shotgun sequence

⇒Summary: seq-len = 8465 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3625-6168 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MOQF01000014.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000014, whole genome shotgun sequence

⇒Summary: seq-len = 80155 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 48162-50622 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MOQF01000003.1 Clostridioides difficile strain 5553-L/ST55 5553_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 122644 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59359-60514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)