CRISPRone

CRISPRone report for GCA_002301615.1_ASM230161v1

♦ Seq 1: MOQI01000055.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000055, whole genome shotgun sequence

⇒Summary: seq-len = 23985 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5195-5616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOQI01000063.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000063, whole genome shotgun sequence

⇒Summary: seq-len = 19802 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18741-19764 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOQI01000022.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000022, whole genome shotgun sequence

⇒Summary: seq-len = 69462 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15061-15155 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOQI01000028.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000028, whole genome shotgun sequence

⇒Summary: seq-len = 59306 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34105-34330 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOQI01000049.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000049, whole genome shotgun sequence

⇒Summary: seq-len = 27985 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3041-3733 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOQI01000051.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000051, whole genome shotgun sequence

⇒Summary: seq-len = 27076 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOQI01000013.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000013, whole genome shotgun sequence

⇒Summary: seq-len = 82693 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16066-16818 bp]: array | spacers
           [Locus range 51385-51742 bp]: array | spacers
           [Locus range 54575-54801 bp]: array | spacers
           [Locus range 55035-55196 bp]: array | spacers
           [Locus range 56995-57483 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOQI01000019.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000019, whole genome shotgun sequence

⇒Summary: seq-len = 74552 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7296-7458 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MOQI01000008.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000008, whole genome shotgun sequence

⇒Summary: seq-len = 106384 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 458-951 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MOQI01000106.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000106, whole genome shotgun sequence

⇒Summary: seq-len = 1724 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MOQI01000006.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 113316 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 84661-86538 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: MOQI01000020.1 Clostridioides difficile strain 5558-AH/ST67 5558_contig000020, whole genome shotgun sequence

⇒Summary: seq-len = 71856 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)