CRISPRone

CRISPRone report for GCA_002301655.1_ASM230165v1

♦ Seq 1: MOQL01000137.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000138, whole genome shotgun sequence

⇒Summary: seq-len = 106001 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3345-3902 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOQL01000198.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000199, whole genome shotgun sequence

⇒Summary: seq-len = 28621 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3149-4304 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOQL01000146.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000147, whole genome shotgun sequence

⇒Summary: seq-len = 15278 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4551-4909 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOQL01000126.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000127, whole genome shotgun sequence

⇒Summary: seq-len = 94364 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5681-5975 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOQL01000151.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000152, whole genome shotgun sequence

⇒Summary: seq-len = 20964 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18778-19861 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOQL01000101.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000101, whole genome shotgun sequence

⇒Summary: seq-len = 32482 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 11798-13270 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOQL01000058.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000058, whole genome shotgun sequence

⇒Summary: seq-len = 7158 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1976-2136 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOQL01000057.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000057, whole genome shotgun sequence

⇒Summary: seq-len = 20961 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2734-4140 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MOQL01000138.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000139, whole genome shotgun sequence

⇒Summary: seq-len = 6647 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2528-3542 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MOQL01000125.1 Clostridioides difficile strain 5616-DH/ST42 5616_contig000126, whole genome shotgun sequence

⇒Summary: seq-len = 105288 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)