CRISPRone

CRISPRone report for GCA_002301705.1_ASM230170v1

♦ Seq 1: MOPV01000002.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 319185 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64561-66095 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOPV01000005.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000005, whole genome shotgun sequence

⇒Summary: seq-len = 191887 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18620-19377 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOPV01000033.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000033, whole genome shotgun sequence

⇒Summary: seq-len = 36259 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3903-5053 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOPV01000013.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000013, whole genome shotgun sequence

⇒Summary: seq-len = 127892 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110324-110484 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOPV01000007.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000007, whole genome shotgun sequence

⇒Summary: seq-len = 170361 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44924-45482 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOPV01000028.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000028, whole genome shotgun sequence

⇒Summary: seq-len = 48657 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44274-44632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOPV01000001.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 319815 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 78538-79154 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOPV01000021.1 Clostridioides difficile strain 5539-Y/ST2 5539_contig000021, whole genome shotgun sequence

⇒Summary: seq-len = 57962 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45162-45256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)