CRISPRone

CRISPRone report for GCA_002301805.1_ASM230180v1

♦ Seq 1: MOQR01000002.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 365149 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 152153-153560 bp]: array | spacers
           [Locus range 204472-204632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOQR01000001.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 479475 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185935-186294 bp]: array | spacers
           [Locus range 394408-394703 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOQR01000025.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000025, whole genome shotgun sequence

⇒Summary: seq-len = 8659 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4722-5736 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOQR01000008.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000008, whole genome shotgun sequence

⇒Summary: seq-len = 196840 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38255-39471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOQR01000006.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 249371 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 244724-245282 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOQR01000004.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000004, whole genome shotgun sequence

⇒Summary: seq-len = 287249 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOQR01000014.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000014, whole genome shotgun sequence

⇒Summary: seq-len = 131731 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112652-113741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOQR01000003.1 Clostridioides difficile strain 6589-DH/ST42 6589_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 345009 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77505-79240 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)