CRISPRone

CRISPRone report for GCA_002301945.1_ASM230194v1

♦ Seq 1: MPEP01000001.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 424923 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 69411-70033 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPEP01000013.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000013, whole genome shotgun sequence

⇒Summary: seq-len = 113950 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 581-1404 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPEP01000020.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000020, whole genome shotgun sequence

⇒Summary: seq-len = 73203 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47146-47503 bp]: array | spacers
           [Locus range 49367-49657 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPEP01000006.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 187342 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 180890-181577 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPEP01000009.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000009, whole genome shotgun sequence

⇒Summary: seq-len = 141550 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26119-27737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPEP01000003.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 358179 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPEP01000031.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000031, whole genome shotgun sequence

⇒Summary: seq-len = 29427 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 844-1802 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPEP01000024.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000024, whole genome shotgun sequence

⇒Summary: seq-len = 62715 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23932-24226 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPEP01000002.1 Clostridioides difficile strain 6635-BI/ST1 6635_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 401539 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59762-59856 bp]: array | spacers
           [Locus range 101477-102102 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)