CRISPRone

CRISPRone report for GCA_002302115.1_ASM230211v1

♦ Seq 1: MPGA01000001.1 Clostridioides difficile strain 7455-A/ST43 7455_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 743843 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 590232-590394 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPGA01000022.1 Clostridioides difficile strain 7455-A/ST43 7455_contig000022, whole genome shotgun sequence

⇒Summary: seq-len = 50805 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4110-5066 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPGA01000029.1 Clostridioides difficile strain 7455-A/ST43 7455_contig000029, whole genome shotgun sequence

⇒Summary: seq-len = 8583 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3106-3862 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPGA01000003.1 Clostridioides difficile strain 7455-A/ST43 7455_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 300624 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 126346-128085 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPGA01000008.1 Clostridioides difficile strain 7455-A/ST43 7455_contig000008, whole genome shotgun sequence

⇒Summary: seq-len = 217109 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124541-125755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPGA01000006.1 Clostridioides difficile strain 7455-A/ST43 7455_contig000006, whole genome shotgun sequence

⇒Summary: seq-len = 253346 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 68146-69033 bp]: array | spacers
           [Locus range 206455-206878 bp]: array | spacers
           [Locus range 207482-207908 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPGA01000017.1 Clostridioides difficile strain 7455-A/ST43 7455_contig000017, whole genome shotgun sequence

⇒Summary: seq-len = 62324 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16705-17199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)