CRISPRone

CRISPRone report for GCA_002302765.1_ASM230276v1

♦ Seq 1: MPFE01000041.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000040, whole genome shotgun sequence

⇒Summary: seq-len = 26954 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19593-20417 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPFE01000001.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 314364 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 243958-244581 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPFE01000002.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 167040 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 845-1803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPFE01000013.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000012, whole genome shotgun sequence

⇒Summary: seq-len = 116891 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPFE01000030.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000029, whole genome shotgun sequence

⇒Summary: seq-len = 62558 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38646-38939 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPFE01000008.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000007, whole genome shotgun sequence

⇒Summary: seq-len = 142031 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26119-27737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPFE01000019.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000018, whole genome shotgun sequence

⇒Summary: seq-len = 105828 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61982-62668 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPFE01000004.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000004, whole genome shotgun sequence

⇒Summary: seq-len = 158323 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 102636-103262 bp]: array | spacers
           [Locus range 144882-144977 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPFE01000024.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000023, whole genome shotgun sequence

⇒Summary: seq-len = 79855 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23548-23837 bp]: array | spacers
           [Locus range 25702-26058 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPFE01000048.1 Clostridioides difficile strain 7471-BI/ST1 7471_contig000047, whole genome shotgun sequence

⇒Summary: seq-len = 17423 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)