CRISPRone

CRISPRone report for GCA_002302845.1_ASM230284v1

♦ Seq 1: MPGC01000065.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000065, whole genome shotgun sequence

⇒Summary: seq-len = 17590 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPGC01000042.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000042, whole genome shotgun sequence

⇒Summary: seq-len = 23842 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6171-6664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPGC01000246.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000246, whole genome shotgun sequence

⇒Summary: seq-len = 4131 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1921-2215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPGC01000126.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000126, whole genome shotgun sequence

⇒Summary: seq-len = 11042 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 643-2067 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPGC01000311.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000311, whole genome shotgun sequence

⇒Summary: seq-len = 1876 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 436-1387 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPGC01000135.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000135, whole genome shotgun sequence

⇒Summary: seq-len = 10256 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5606-5766 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPGC01000009.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000009, whole genome shotgun sequence

⇒Summary: seq-len = 46588 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPGC01000294.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000294, whole genome shotgun sequence

⇒Summary: seq-len = 2469 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1510-1996 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPGC01000255.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000255, whole genome shotgun sequence

⇒Summary: seq-len = 3657 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2917-3405 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPGC01000174.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000174, whole genome shotgun sequence

⇒Summary: seq-len = 7776 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2487-3038 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPGC01000230.1 Clostridioides difficile strain 7478-NonSp/novelST LCH7478_contig000230, whole genome shotgun sequence

⇒Summary: seq-len = 4622 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1970-2660 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)