CRISPRone

CRISPRone report for GCA_002302865.1_ASM230286v1

♦ Seq 1: MPFK01000097.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000097, whole genome shotgun sequence

⇒Summary: seq-len = 16004 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7694-7918 bp]: array | spacers
           [Locus range 11381-12200 bp]: array | spacers
           [Locus range 12803-13028 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPFK01000024.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000024, whole genome shotgun sequence

⇒Summary: seq-len = 47338 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPFK01000003.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 107674 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53190-53414 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPFK01000022.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000022, whole genome shotgun sequence

⇒Summary: seq-len = 48855 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13580-14853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPFK01000126.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000126, whole genome shotgun sequence

⇒Summary: seq-len = 8930 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2961-3453 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPFK01000107.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000107, whole genome shotgun sequence

⇒Summary: seq-len = 12118 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 269-2006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPFK01000067.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000067, whole genome shotgun sequence

⇒Summary: seq-len = 23604 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13815-14567 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPFK01000005.1 Clostridioides difficile strain 7479-NonSp/ST3 LCH7479_contig000005, whole genome shotgun sequence

⇒Summary: seq-len = 81355 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29242-29669 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)