CRISPRone

CRISPRone report for GCA_002302905.1_ASM230290v1

♦ Seq 1: MPFM01000121.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000121, whole genome shotgun sequence

⇒Summary: seq-len = 11596 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 135-1482 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPFM01000109.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000109, whole genome shotgun sequence

⇒Summary: seq-len = 13759 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10430-11054 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPFM01000114.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000114, whole genome shotgun sequence

⇒Summary: seq-len = 13175 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12065-12425 bp]: array | spacers
           [Locus range 13023-13185 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPFM01000130.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000130, whole genome shotgun sequence

⇒Summary: seq-len = 10964 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10201-10627 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPFM01000141.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000141, whole genome shotgun sequence

⇒Summary: seq-len = 9700 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4211-4306 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPFM01000017.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000017, whole genome shotgun sequence

⇒Summary: seq-len = 44484 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8335-8494 bp]: array | spacers
           [Locus range 8664-9215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPFM01000049.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000049, whole genome shotgun sequence

⇒Summary: seq-len = 26304 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5656-6344 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPFM01000196.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000196, whole genome shotgun sequence

⇒Summary: seq-len = 4915 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 214-1755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPFM01000120.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000120, whole genome shotgun sequence

⇒Summary: seq-len = 11823 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8542-9359 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPFM01000044.1 Clostridioides difficile strain 7481-NonSp/ST59 LCH7481_contig000044, whole genome shotgun sequence

⇒Summary: seq-len = 28059 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)