CRISPRone

CRISPRone report for GCA_002302975.1_ASM230297v1

♦ Seq 1: MPGN01000175.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000175, whole genome shotgun sequence

⇒Summary: seq-len = 6360 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPGN01000147.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000147, whole genome shotgun sequence

⇒Summary: seq-len = 8905 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4943-5497 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPGN01000173.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000173, whole genome shotgun sequence

⇒Summary: seq-len = 6381 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2908-3921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPGN01000158.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000158, whole genome shotgun sequence

⇒Summary: seq-len = 7769 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2215-2310 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPGN01000053.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000053, whole genome shotgun sequence

⇒Summary: seq-len = 26707 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19956-20845 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPGN01000139.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000139, whole genome shotgun sequence

⇒Summary: seq-len = 9583 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5824-5984 bp]: array | spacers
           [Locus range 8652-8878 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPGN01000055.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000055, whole genome shotgun sequence

⇒Summary: seq-len = 26221 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3895-4054 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPGN01000012.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000012, whole genome shotgun sequence

⇒Summary: seq-len = 50975 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18349-18837 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPGN01000014.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000014, whole genome shotgun sequence

⇒Summary: seq-len = 50351 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19174-20647 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPGN01000178.1 Clostridioides difficile strain 7488-NonSp/ST103 LCH7488_contig000178, whole genome shotgun sequence

⇒Summary: seq-len = 5958 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 353-1959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)