CRISPRone

CRISPRone report for GCA_002303075.1_ASM230307v1

♦ Seq 1: MPFS01000027.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000027, whole genome shotgun sequence

⇒Summary: seq-len = 27317 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23306-23401 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPFS01000007.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000007, whole genome shotgun sequence

⇒Summary: seq-len = 48222 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPFS01000113.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000113, whole genome shotgun sequence

⇒Summary: seq-len = 13294 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPFS01000191.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000191, whole genome shotgun sequence

⇒Summary: seq-len = 7948 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1022-1380 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPFS01000338.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000338, whole genome shotgun sequence

⇒Summary: seq-len = 1804 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 435-1254 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPFS01000297.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000297, whole genome shotgun sequence

⇒Summary: seq-len = 3224 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPFS01000124.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000124, whole genome shotgun sequence

⇒Summary: seq-len = 12107 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8699-9585 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPFS01000406.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000406, whole genome shotgun sequence

⇒Summary: seq-len = 517 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 228-519 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPFS01000287.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000287, whole genome shotgun sequence

⇒Summary: seq-len = 3609 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2896-3387 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPFS01000332.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000332, whole genome shotgun sequence

⇒Summary: seq-len = 1902 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 157-843 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPFS01000078.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000078, whole genome shotgun sequence

⇒Summary: seq-len = 16806 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2749-4619 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: MPFS01000290.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000290, whole genome shotgun sequence

⇒Summary: seq-len = 3431 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1179-1468 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: MPFS01000137.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000137, whole genome shotgun sequence

⇒Summary: seq-len = 10958 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5784-6010 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: MPFS01000028.1 Clostridioides difficile strain 7496-D/ST9 LCH7496_contig000028, whole genome shotgun sequence

⇒Summary: seq-len = 26683 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22160-22651 bp]: array | spacers
           [Locus range 23361-23521 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)