CRISPRone

CRISPRone report for GCA_002303085.1_ASM230308v1

♦ Seq 1: MPFR01000044.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000044, whole genome shotgun sequence

⇒Summary: seq-len = 33773 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3868-4363 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPFR01000015.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000015, whole genome shotgun sequence

⇒Summary: seq-len = 66042 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45149-46957 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPFR01000005.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000005, whole genome shotgun sequence

⇒Summary: seq-len = 93153 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 55569-55859 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPFR01000062.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000062, whole genome shotgun sequence

⇒Summary: seq-len = 26253 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22583-23265 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPFR01000032.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000032, whole genome shotgun sequence

⇒Summary: seq-len = 40303 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPFR01000025.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000025, whole genome shotgun sequence

⇒Summary: seq-len = 49258 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6042-6865 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPFR01000048.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000048, whole genome shotgun sequence

⇒Summary: seq-len = 32586 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9965-10650 bp]: array | spacers
           [Locus range 12353-12778 bp]: array | spacers
           [Locus range 15234-15524 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPFR01000002.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000002, whole genome shotgun sequence

⇒Summary: seq-len = 107683 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33048-33338 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPFR01000001.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 126410 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 84764-85121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPFR01000148.1 Clostridioides difficile strain 7494-E/ST6 7494_contig000148, whole genome shotgun sequence

⇒Summary: seq-len = 3740 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 145-1479 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)