CRISPRone

CRISPRone report for GCA_002303165.1_ASM230316v1

♦ Seq 1: MPFW01000003.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000003, whole genome shotgun sequence

⇒Summary: seq-len = 142581 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26669-28287 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPFW01000066.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000066, whole genome shotgun sequence

⇒Summary: seq-len = 17106 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPFW01000019.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000019, whole genome shotgun sequence

⇒Summary: seq-len = 73768 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16363-16988 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPFW01000015.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000015, whole genome shotgun sequence

⇒Summary: seq-len = 87163 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 70043-70665 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPFW01000047.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000047, whole genome shotgun sequence

⇒Summary: seq-len = 29718 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28477-29163 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPFW01000045.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000045, whole genome shotgun sequence

⇒Summary: seq-len = 30531 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25120-25215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPFW01000009.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000009, whole genome shotgun sequence

⇒Summary: seq-len = 102845 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPFW01000020.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000020, whole genome shotgun sequence

⇒Summary: seq-len = 73545 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24159-24448 bp]: array | spacers
           [Locus range 26313-26669 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPFW01000026.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000026, whole genome shotgun sequence

⇒Summary: seq-len = 62718 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 339-1162 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPFW01000043.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000043, whole genome shotgun sequence

⇒Summary: seq-len = 32006 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 845-1803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPFW01000036.1 Clostridioides difficile strain 7501-BI/ST1 7501_contig000036, whole genome shotgun sequence

⇒Summary: seq-len = 40331 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31377-31671 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)