CRISPRone

CRISPRone report for GCA_002303225.1_ASM230322v1

♦ Seq 1: MPJN01000637.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000636, whole genome shotgun sequence

⇒Summary: seq-len = 1801 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 636-1775 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPJN01000511.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000510, whole genome shotgun sequence

⇒Summary: seq-len = 2662 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1643-1803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPJN01000422.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000422, whole genome shotgun sequence

⇒Summary: seq-len = 3284 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPJN01000487.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000486, whole genome shotgun sequence

⇒Summary: seq-len = 2804 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPJN01001020.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig001018, whole genome shotgun sequence

⇒Summary: seq-len = 326 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-289 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPJN01000663.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000662, whole genome shotgun sequence

⇒Summary: seq-len = 1665 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPJN01000674.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000673, whole genome shotgun sequence

⇒Summary: seq-len = 1626 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1208-1498 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPJN01000327.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000327, whole genome shotgun sequence

⇒Summary: seq-len = 4304 bp; # of CRISPR array = 1; # of cas gene = 4  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 4064-4289 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPJN01000380.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000380, whole genome shotgun sequence

⇒Summary: seq-len = 3649 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19-1102 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPJN01000546.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000545, whole genome shotgun sequence

⇒Summary: seq-len = 2388 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2235-2329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPJN01000031.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000031, whole genome shotgun sequence

⇒Summary: seq-len = 14157 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9882-10240 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: MPJN01000120.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000120, whole genome shotgun sequence

⇒Summary: seq-len = 8293 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2532-3148 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: MPJN01001008.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig001006, whole genome shotgun sequence

⇒Summary: seq-len = 437 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-415 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: MPJN01000473.1 Clostridioides difficile strain 6603-Y/ST2 6603_contig000473, whole genome shotgun sequence

⇒Summary: seq-len = 2929 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18-182 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)