CRISPRone

CRISPRone report for GCA_002303415.1_ASM230341v1

♦ Seq 1: MOTD01000098.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000098, whole genome shotgun sequence

⇒Summary: seq-len = 11873 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2808-3037 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MOTD01000081.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000081, whole genome shotgun sequence

⇒Summary: seq-len = 18064 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 15585-16073 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MOTD01000118.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000118, whole genome shotgun sequence

⇒Summary: seq-len = 7350 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 231-2042 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MOTD01000093.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000093, whole genome shotgun sequence

⇒Summary: seq-len = 13536 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7386-7614 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MOTD01000040.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000040, whole genome shotgun sequence

⇒Summary: seq-len = 36505 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MOTD01000112.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000112, whole genome shotgun sequence

⇒Summary: seq-len = 8555 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4721-5206 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MOTD01000047.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000047, whole genome shotgun sequence

⇒Summary: seq-len = 30858 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2976-3732 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MOTD01000001.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 156758 bp; # of CRISPR array = 5; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 77498-78124 bp]: array | spacers
           [Locus range 79837-80127 bp]: array | spacers
           [Locus range 81990-82215 bp]: array | spacers
           [Locus range 84317-84872 bp]: array | spacers
           [Locus range 85475-85899 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MOTD01000078.1 Clostridioides difficile strain 6616-NonSp/novelST 6616_contig000078, whole genome shotgun sequence

⇒Summary: seq-len = 19055 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9534-9627 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)