CRISPRone

CRISPRone report for GCA_002303605.1_ASM230360v1

♦ Seq 1: MPJR01000176.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000176, whole genome shotgun sequence

⇒Summary: seq-len = 5497 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3903-5053 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MPJR01000082.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000082, whole genome shotgun sequence

⇒Summary: seq-len = 17705 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5780-6204 bp]: array | spacers
           [Locus range 7808-8032 bp]: array | spacers
           [Locus range 9825-10579 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MPJR01000227.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000226, whole genome shotgun sequence

⇒Summary: seq-len = 2742 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1142-1302 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: MPJR01000027.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000027, whole genome shotgun sequence

⇒Summary: seq-len = 38003 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16501-16595 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: MPJR01000063.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000063, whole genome shotgun sequence

⇒Summary: seq-len = 21087 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2929-3686 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: MPJR01000074.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000074, whole genome shotgun sequence

⇒Summary: seq-len = 19100 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7444-8977 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: MPJR01000051.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000051, whole genome shotgun sequence

⇒Summary: seq-len = 26154 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: MPJR01000242.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000241, whole genome shotgun sequence

⇒Summary: seq-len = 2055 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1712-1872 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: MPJR01000137.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000137, whole genome shotgun sequence

⇒Summary: seq-len = 9325 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4232-4849 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: MPJR01000001.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000001, whole genome shotgun sequence

⇒Summary: seq-len = 95129 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44274-44632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: MPJR01000210.1 Clostridioides difficile strain 6625-Y/ST2 LCH6625_contig000210, whole genome shotgun sequence

⇒Summary: seq-len = 3461 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 70-368 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)